Cookies on this website

We use cookies to ensure that we give you the best experience on our website. If you click 'Accept all cookies' we'll assume that you are happy to receive all cookies and you won't see this message again. If you click 'Reject all non-essential cookies' only necessary cookies providing core functionality such as security, network management, and accessibility will be enabled. Click 'Find out more' for information on how to change your cookie settings.

The complete genome of goose picornavirus 1 (GPV-1) strain goose/NLSZK2/HUN/2013 (MF358731) was determined by RT-PCR and next-generation sequencing from a cloacal sample of a migratory waterfowl, greater white-fronted goose (Anser albifrons) in Hungary. The genome of GPV-1 shows an L-3-3-4 organization pattern with a 5'-terminal origin of replication (ORI) region, a type-IV IRES, and an Hbox/NC-type 2A protein. This virus showed the highest overall sequence identity to the members of the genus Kobuvirus, although the phylogenetic position of GPV-1 is different in the analyzed P1, 2C and 3CD phylogenetic trees, which further increases the diversity of known avian picornaviruses.

Original publication

DOI

10.1007/s00705-017-3696-3

Type

Journal article

Journal

Arch Virol

Publication Date

04/2018

Volume

163

Pages

1087 - 1090

Keywords

Amino Acid Sequence, Animal Migration, Animals, Base Sequence, Bird Diseases, Geese, Genome, Viral, Genomics, High-Throughput Nucleotide Sequencing, Hungary, Phylogeny, Picornaviridae, Picornaviridae Infections, Sequence Alignment, Sequence Homology, Amino Acid, Viral Proteins