{
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        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"pull-right\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1101/2025.09.15.676237\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2 class=\"media-heading\">\n                    <a href=\"publication_modal/2289875\" title=\"Nanopore long-read only genome assembly of clinical Enterobacterales isolates is complete and accurate\" data-toggle=\"modal\" data-target=\"#modal\" itemprop=\"name\" data-href=\"publication_modal/2289875\">Nanopore long-read only genome assembly of clinical Enterobacterales isolates is complete and accurate</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        \n                            <span class=\"label label-primary\">Preprint</span>\n                        \n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Nagy D. et al, (2025)</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n", 
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"pull-right\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1016/j.eclinm.2025.103416\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2 class=\"media-heading\">\n                    <a href=\"publication_modal/2285191\" title=\"Laboratory evaluation of 185 commercial assays for detecting SARS-CoV-2: the UK response for mass testing\" data-toggle=\"modal\" data-target=\"#modal\" itemprop=\"name\" data-href=\"publication_modal/2285191\">Laboratory evaluation of 185 commercial assays for detecting SARS-CoV-2: the UK response for mass testing</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        \n                            <span class=\"label label-primary\">Journal article</span>\n                        \n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Bown A. et al, (2025), eClinicalMedicine, 87, 103416 - 103416</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n", 
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"pull-right\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1016/j.eclinm.2025.103454\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2 class=\"media-heading\">\n                    <a href=\"publication_modal/2283019\" title=\"Evaluation of SARS-CoV-2 lateral flow device sensitivity: a comparison of systematic laboratory assessments with manufacturer-reported sensitivity\" data-toggle=\"modal\" data-target=\"#modal\" itemprop=\"name\" data-href=\"publication_modal/2283019\">Evaluation of SARS-CoV-2 lateral flow device sensitivity: a comparison of systematic laboratory assessments with manufacturer-reported sensitivity</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        \n                            <span class=\"label label-primary\">Journal article</span>\n                        \n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Kulasegaran-Shylini R. et al, (2025), eClinicalMedicine, 87, 103454 - 103454</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n", 
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"pull-right\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.7554/elife.97751.2\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2 class=\"media-heading\">\n                    <a href=\"publication_modal/2242938\" title=\"The impact of different antimicrobial exposures on the gut microbiome in the ARMORD observational study\" data-toggle=\"modal\" data-target=\"#modal\" itemprop=\"name\" data-href=\"publication_modal/2242938\">The impact of different antimicrobial exposures on the gut microbiome in the ARMORD observational study</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        \n                            <span class=\"label label-primary\">Preprint</span>\n                        \n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Peto L. et al, (2025)</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n", 
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"pull-right\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1099/mgen.0.001429\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2 class=\"media-heading\">\n                    <a href=\"publication_modal/2122494\" title=\"An improved catalogue for whole-genome sequencing prediction of bedaquiline resistance in Mycobacterium tuberculosis using a reproducible algorithmic approach\" data-toggle=\"modal\" data-target=\"#modal\" itemprop=\"name\" data-href=\"publication_modal/2122494\">An improved catalogue for whole-genome sequencing prediction of bedaquiline resistance in Mycobacterium tuberculosis using a reproducible algorithmic approach</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        \n                            <span class=\"label label-primary\">Journal article</span>\n                        \n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Adlard D. et al, (2025), Microbial Genomics, 11</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n", 
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"pull-right\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1038/s41467-025-57370-z\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2 class=\"media-heading\">\n                    <a href=\"publication_modal/2093040\" title=\"Identification of undetected SARS-CoV-2 infections by clustering of Nucleocapsid antibody trajectories\" data-toggle=\"modal\" data-target=\"#modal\" itemprop=\"name\" data-href=\"publication_modal/2093040\">Identification of undetected SARS-CoV-2 infections by clustering of Nucleocapsid antibody trajectories</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        \n                            <span class=\"label label-primary\">Journal article</span>\n                        \n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Zwerwer LR. et al, (2025), Nature Communications, 16</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n", 
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"pull-right\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1038/s42003-025-07740-6\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2 class=\"media-heading\">\n                    <a href=\"publication_modal/2074217\" title=\"Ribosome phenotypes for rapid classification of antibiotic-susceptible and resistant strains of Escherichia coli.\" data-toggle=\"modal\" data-target=\"#modal\" itemprop=\"name\" data-href=\"publication_modal/2074217\">Ribosome phenotypes for rapid classification of antibiotic-susceptible and resistant strains of Escherichia coli.</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        \n                            <span class=\"label label-primary\">Journal article</span>\n                        \n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Farrar A. et al, (2025), Communications biology, 8</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n", 
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"pull-right\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1101/2025.01.30.635633\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2 class=\"media-heading\">\n                    <a href=\"publication_modal/2085009\" title=\"An improved catalogue for whole-genome sequencing prediction of bedaquiline resistance in\n                  M. tuberculosis\n                  using a reproducible algorithmic approach\" data-toggle=\"modal\" data-target=\"#modal\" itemprop=\"name\" data-href=\"publication_modal/2085009\">An improved catalogue for whole-genome sequencing prediction of bedaquiline resistance in\n                  M. tuberculosis\n                  using a reproducible algorithmic approach</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        \n                            <span class=\"label label-primary\">Preprint</span>\n                        \n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Adlard D. et al, (2025)</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n", 
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"pull-right\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1099/mgen.0.001340\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2 class=\"media-heading\">\n                    <a href=\"publication_modal/2068626\" title=\"Multiple introductions of NRCS-A Staphylococcus capitis to the neonatal intensive care unit drive neonatal bloodstream infections: a case-control and environmental genomic survey\" data-toggle=\"modal\" data-target=\"#modal\" itemprop=\"name\" data-href=\"publication_modal/2068626\">Multiple introductions of NRCS-A Staphylococcus capitis to the neonatal intensive care unit drive neonatal bloodstream infections: a case-control and environmental genomic survey</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        \n                            <span class=\"label label-primary\">Journal article</span>\n                        \n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Lees EA. et al, (2025), Microbial Genomics, 11</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n", 
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"pull-right\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1101/2025.06.09.658732\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2 class=\"media-heading\">\n                    <a href=\"publication_modal/2245133\" title=\"Deacon: fast sequence filtering and contaminant depletion\" data-toggle=\"modal\" data-target=\"#modal\" itemprop=\"name\" data-href=\"publication_modal/2245133\">Deacon: fast sequence filtering and contaminant depletion</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        \n                            <span class=\"label label-primary\">Preprint</span>\n                        \n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Constantinides B. et al, (2025)</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n", 
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"pull-right\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1038/s44259-024-00069-w\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2 class=\"media-heading\">\n                    <a href=\"publication_modal/2067660\" title=\"Developing a framework for tracking antimicrobial resistance gene movement in a persistent environmental reservoir\" data-toggle=\"modal\" data-target=\"#modal\" itemprop=\"name\" data-href=\"publication_modal/2067660\">Developing a framework for tracking antimicrobial resistance gene movement in a persistent environmental reservoir</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        \n                            <span class=\"label label-primary\">Journal article</span>\n                        \n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Mathers AJ. et al, (2024), npj Antimicrobials and Resistance, 2</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n", 
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"pull-right\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1371/journal.pgph.0003762\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2 class=\"media-heading\">\n                    <a href=\"publication_modal/2032160\" title=\"A consensus statement on dual purpose pathogen surveillance systems: The always on approach\" data-toggle=\"modal\" data-target=\"#modal\" itemprop=\"name\" data-href=\"publication_modal/2032160\">A consensus statement on dual purpose pathogen surveillance systems: The always on approach</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        \n                            <span class=\"label label-primary\">Journal article</span>\n                        \n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">van der Westhuizen H-M. et al, (2024), PLOS Global Public Health, 4, e0003762 - e0003762</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n", 
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"pull-right\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1101/2024.11.08.622466\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2 class=\"media-heading\">\n                    <a href=\"publication_modal/2062780\" title=\"Characterising the performance of an antibiotic resistance prediction tool, gnomonicus, using a diverse testset of 2,663\n                  Mycobacterium tuberculosis\n                  samples\" data-toggle=\"modal\" data-target=\"#modal\" itemprop=\"name\" data-href=\"publication_modal/2062780\">Characterising the performance of an antibiotic resistance prediction tool, gnomonicus, using a diverse testset of 2,663\n                  Mycobacterium tuberculosis\n                  samples</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        \n                            <span class=\"label label-primary\">Preprint</span>\n                        \n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Westhead J. et al, (2024)</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n", 
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"pull-right\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1016/s2666-5247(24)00152-6\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2 class=\"media-heading\">\n                    <a href=\"publication_modal/2004368\" title=\"Exploring uncatalogued genetic variation in antimicrobial resistance gene families in Escherichia coli: an observational analysis\" data-toggle=\"modal\" data-target=\"#modal\" itemprop=\"name\" data-href=\"publication_modal/2004368\">Exploring uncatalogued genetic variation in antimicrobial resistance gene families in Escherichia coli: an observational analysis</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        \n                            <span class=\"label label-primary\">Journal article</span>\n                        \n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Lipworth S. et al, (2024), The Lancet Microbe, 5, 100913 - 100913</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n", 
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"pull-right\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1099/mgen.0.001296\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2 class=\"media-heading\">\n                    <a href=\"publication_modal/2044685\" title=\"Comparison of direct cDNA and PCR-cDNA Nanopore sequencing of RNA from Escherichia coli isolates\" data-toggle=\"modal\" data-target=\"#modal\" itemprop=\"name\" data-href=\"publication_modal/2044685\">Comparison of direct cDNA and PCR-cDNA Nanopore sequencing of RNA from Escherichia coli isolates</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        \n                            <span class=\"label label-primary\">Journal article</span>\n                        \n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Rodger G. et al, (2024), Microbial Genomics, 10</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n"
    ], 
    "more": "\n\n    \n        <a href=\"https://www.ndm.ox.ac.uk/publications/search?random=9f937bb8-db15-40b6-bdc6-8b3d61bb17c5&amp;b_start:int=30&amp;author=clab0012&amp;format=json\" title=\"Load more\" class=\"btn btn-default load-more-button\">\n            Load More\n        </a>\n    \n\n", 
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