{
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        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1101/2023.10.14.23297021\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1611089\" title=\"Population dynamics of HIV drug resistance during treatment scale-up in Uganda: a population-based longitudinal study\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Population dynamics of HIV drug resistance during treatment scale-up in Uganda: a population-based longitudinal study</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.ndm.ox.ac.uk/publications/search?type=7\" title=\"Preprint\">\n                            <span class=\"badge bg-primary\">Preprint</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Martin MA. et al, (2023)</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1371/journal.ppat.1011706\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1547327\" title=\"Correction: Viral burden is associated with age, vaccination, and viral variant in a population-representative study of SARS-CoV-2 that accounts for time-since-infection-related sampling bias\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Correction: Viral burden is associated with age, vaccination, and viral variant in a population-representative study of SARS-CoV-2 that accounts for time-since-infection-related sampling bias</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.ndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Fryer HR. et al, (2023), PLOS Pathogens, 19, e1011706 - e1011706</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1073/pnas.2312649120\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1536755\" title=\"Reply to Ekstr\u00f6m and Ottersen: Real-time access to data during outbreaks is a key to avoid a local epidemic becoming a global pandemic\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Reply to Ekstr\u00f6m and Ottersen: Real-time access to data during outbreaks is a key to avoid a local epidemic becoming a global pandemic</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.ndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Stenseth NC. et al, (2023), Proceedings of the National Academy of Sciences, 120</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1101/2023.09.28.559724\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1577942\" title=\"Learning patterns of HIV-1 co-resistance to broadly neutralizing antibodies with reduced subtype bias using multi-task learning\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Learning patterns of HIV-1 co-resistance to broadly neutralizing antibodies with reduced subtype bias using multi-task learning</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.ndm.ox.ac.uk/publications/search?type=7\" title=\"Preprint\">\n                            <span class=\"badge bg-primary\">Preprint</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Igiraneza AB. et al, (2023)</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1371/journal.ppat.1011461\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1510173\" title=\"Viral burden is associated with age, vaccination, and viral variant in a population-representative study of SARS-CoV-2 that accounts for time-since-infection-related sampling bias\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Viral burden is associated with age, vaccination, and viral variant in a population-representative study of SARS-CoV-2 that accounts for time-since-infection-related sampling bias</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.ndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Fryer HR. et al, (2023), PLOS Pathogens, 19, e1011461 - e1011461</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1093/jac/dkad195\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1489570\" title=\"Limited emergence of resistance to integrase strand transfer inhibitors (INSTIs) in ART-experienced participants failing dolutegravir-based antiretroviral therapy: a cross-sectional analysis of a Northeast Nigerian cohort\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Limited emergence of resistance to integrase strand transfer inhibitors (INSTIs) in ART-experienced participants failing dolutegravir-based antiretroviral therapy: a cross-sectional analysis of a Northeast Nigerian cohort</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.ndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Abdullahi A. et al, (2023), Journal of Antimicrobial Chemotherapy, 78, 2000 - 2007</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1126/science.adg6605\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1494669\" title=\"Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.ndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Tsui JL-H. et al, (2023), Science, 381, 336 - 343</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1371/journal.pone.0284187\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1995115\" title=\"The SARS-CoV-2 Alpha variant was associated with increased clinical severity of COVID-19 in Scotland: A genomics-based retrospective cohort analysis\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">The SARS-CoV-2 Alpha variant was associated with increased clinical severity of COVID-19 in Scotland: A genomics-based retrospective cohort analysis</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.ndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Pascall DJ. et al, (2023), PLOS ONE, 18, e0284187 - e0284187</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1097/qad.0000000000003463\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1327627\" title=\"Uptake of medical male circumcision with household-based testing, and the association of traditional male circumcision and HIV infection\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Uptake of medical male circumcision with household-based testing, and the association of traditional male circumcision and HIV infection</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.ndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Zewdie K. et al, (2023), AIDS, 37, 795 - 802</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.21203/rs.3.rs-2696883/v1\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1884178\" title=\"Growing gender disparity in HIV infection in Africa: sources and policy implications\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Growing gender disparity in HIV infection in Africa: sources and policy implications</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.ndm.ox.ac.uk/publications/search?type=7\" title=\"Preprint\">\n                            <span class=\"badge bg-primary\">Preprint</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Ratmann O. et al, (2023)</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1101/2023.03.16.23287351\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1548087\" title=\"Longitudinal population-level HIV epidemiologic and genomic surveillance highlights growing gender disparity of HIV transmission in Uganda\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Longitudinal population-level HIV epidemiologic and genomic surveillance highlights growing gender disparity of HIV transmission in Uganda</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.ndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Monod M. et al, (2023)</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1073/pnas.2220080120\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1331226\" title=\"How to avoid a local epidemic becoming a global pandemic\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">How to avoid a local epidemic becoming a global pandemic</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.ndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Stenseth NC. et al, (2023), Proceedings of the National Academy of Sciences, 120</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1093/jac/dkac430\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1327626\" title=\"Frequency matters: comparison of drug resistance mutation detection by Sanger and next-generation sequencing in HIV-1\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Frequency matters: comparison of drug resistance mutation detection by Sanger and next-generation sequencing in HIV-1</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.ndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Balakrishna S. et al, (2023), Journal of Antimicrobial Chemotherapy, 78, 656 - 664</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1016/j.epidem.2022.100662\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1317331\" title=\"Large-scale calibration and simulation of COVID-19 epidemiologic scenarios to support healthcare planning\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Large-scale calibration and simulation of COVID-19 epidemiologic scenarios to support healthcare planning</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.ndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Groves-Kirkby N. et al, (2023), Epidemics, 42, 100662 - 100662</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        <div class=\"altmetric-embed\" data-badge-type=\"donut\" data-doi=\"10.1038/s41467-023-36495-z\" data-link-target=\"_blank\"></div>\n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1330989\" title=\"Epidemiological impacts of the NHS COVID-19 app in England and Wales throughout its first year\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Epidemiological impacts of the NHS COVID-19 app in England and Wales throughout its first year</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.ndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Kendall M. et al, (2023), Nature Communications, 14</p>\n                \n                        \n                \n                    <p>\n                        \n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n"
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