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Search results (85)

« Back to Publications

Attenuation of HIV severity by slightly deleterious mutations can explain the long-term trajectory of virulence evolution.

Longley H. et al, (2025), PLoS computational biology, 21

Genetically distinct within-host subpopulations of hepatitis C virus persist after Direct-Acting Antiviral treatment failure

Zhao L. et al, (2025), PLOS Pathogens, 21, e1012959 - e1012959

Epidemiological and phylogenetic analyses of public SARS-CoV-2 data from Malawi

Afuleni MK. et al, (2025), PLOS Global Public Health, 5, e0003943 - e0003943

Reconstructing the first COVID-19 pandemic wave with minimal data in England.

Chen S. et al, (2025), Epidemics, 50

Lineage-aware evolutionary analysis of hepatitis C virus within-host dynamics

Zhao L. et al, (2024)

Improving the representativeness of UK’s national COVID-19 Infection Survey through spatio-temporal regression and post-stratification

Pouwels KB. et al, (2024), Nature Communications, 15

Unsupervised identification of significant lineages of SARS-CoV-2 through scalable machine learning methods

Cahuantzi R. et al, (2024), Proceedings of the National Academy of Sciences, 121

Prevalence of persistent SARS-CoV-2 in a large community surveillance study

Ghafari M. et al, (2024), Nature, 626, 1094 - 1101

Risk of SARS-CoV-2 reinfection during multiple Omicron variant waves in the UK general population

Wei J. et al, (2024), Nature Communications, 15

The social role of defective viral genomes in chronic viral infections: a commentary on Leeks et al. 2023.

Zhao L. and Lythgoe KA., (2023), Journal of evolutionary biology, 36, 1577 - 1581

Lineage replacement and evolution captured by 3 years of the United Kingdom Coronavirus (COVID-19) Infection Survey

Lythgoe KA. et al, (2023), Proceedings of the Royal Society B: Biological Sciences, 290

Directional predictions of HIV transmission with optimised genomics in cohorts of serodiscordant couples

Zhao L. et al, (2023)

Correction: Viral burden is associated with age, vaccination, and viral variant in a population-representative study of SARS-CoV-2 that accounts for time-since-infection-related sampling bias

Fryer HR. et al, (2023), PLOS Pathogens, 19, e1011706 - e1011706

Viral burden is associated with age, vaccination, and viral variant in a population-representative study of SARS-CoV-2 that accounts for time-since-infection-related sampling bias

Fryer HR. et al, (2023), PLOS Pathogens, 19, e1011461 - e1011461

The evolution of SARS-CoV-2.

Markov PV. et al, (2023), Nature reviews. Microbiology, 21, 361 - 379

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