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Publications

An enrichment protocol and analysis pipeline for long read sequencing of the hepatitis B virus transcriptome

Ng E. et al, (2023), Journal of General Virology, 104

The impact of pre-existing cross-reactive immunity on SARS-CoV-2 infection and vaccine responses

Murray SM. et al, (2023), Nature Reviews Immunology, 23, 304 - 316

A systematic review of Hepatitis B virus (HBV) prevalence and genotypes in Kenya: Data to inform clinical care and health policy

Downs LO. et al, (2023), PLOS Global Public Health, 3, e0001165 - e0001165

Utility of a buccal swab point-of-care test for the IFNL4 genotype in the era of direct acting antivirals for hepatitis C virus

Sy A. et al, (2023), PLOS ONE, 18, e0280551 - e0280551

Efficacy of ultra-short, response-guided sofosbuvir and daclatasvir therapy for hepatitis C in a single-arm mechanistic pilot study

Flower B. et al, (2023), eLife, 12

A calculated risk: Evaluating HIV resistance to the broadly neutralising antibodies10-1074 and 3BNC117

Zacharopoulou P. et al, (2022), Current Opinion in HIV and AIDS, 17, 352 - 358

Constructing custom-made radiotranscriptomic signatures of vascular inflammation from routine CT angiograms: a prospective outcomes validation study in COVID-19

Kotanidis CP. et al, (2022), The Lancet Digital Health, 4, e705 - e716

Genetic variation in TERT modifies the risk of hepatocellular carcinoma in alcohol-related cirrhosis: results from a genome-wide case-control study

Buch S. et al, (2022), Gut

Defining the key intrahepatic gene networks in HCV infection driven by sex

Marchi E. et al, (2022), Gut

Durability of ChAdOx1 nCoV-19 vaccination in people living with HIV

Ogbe A. et al, (2022), JCI Insight, 7

Divergent trajectories of antiviral memory after SARS-CoV-2 infection

Tomic A. et al, (2022), Nature Communications, 13

A blood atlas of COVID-19 defines hallmarks of disease severity and specificity

Ahern DJ. et al, (2022), Cell, 185, 916 - 938.e58

Comprehensive Comparative Analysis of Standard Validated, Genetic, and Novel Biomarkers to Enhance Prognostic Risk-stratification in Patients with Hepatitis C Cirrhosis.

Innes H. et al, (2022), Clinical and Translational Gastroenterology, Publish Ahead of Print

T-cell and antibody responses to first BNT162b2 vaccine dose in previously infected and SARS-CoV-2-naive UK health-care workers: a multicentre prospective cohort study

Angyal A. et al, (2022), The Lancet Microbe, 3, e21 - e31

The rs429358 Locus in Apolipoprotein E Is Associated With Hepatocellular Carcinoma in Patients With Cirrhosis

Innes H. et al, (2021), Hepatology Communications

Distinct patterns of within-host virus populations between two subgroups of human respiratory syncytial virus

Lin G-L. et al, (2021), Nature Communications, 12

Performance of models to predict hepatocellular carcinoma risk among UK patients with cirrhosis and cured HCV infection

Innes H. et al, (2021), JHEP Reports, 3, 100384 - 100384

T cell assays differentiate clinical and subclinical SARS-CoV-2 infections from cross-reactive antiviral responses

Ogbe A. et al, (2021), Nature Communications, 12

Viral genome wide association study identifies novel hepatitis C virus polymorphisms associated with sofosbuvir treatment failure

Smith DA. et al, (2021), Nature Communications, 12

An HLA-I signature favouring KIR-educated Natural Killer cells mediates immune control of HIV in children and contrasts with the HLA-B-restricted CD8+ T-cell-mediated immune control in adults

Vieira VA. et al, (2021), PLOS Pathogens, 17, e1010090 - e1010090

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