Chemical Biology of Nucleic Acid Modifications – Celebrating the Groundbreaking Contributions of Chuan He
Journal article
Song CX. et al, (2024), Israel Journal of Chemistry, 64
Direct, Quantitative, and Base-Resolution Sequencing of DNA and RNA Modifications
Journal article
Xu H. and Song CX., (2024), Israel Journal of Chemistry
DMRT1 regulates human germline commitment.
Journal article
Irie N. et al, (2023), Nature cell biology
Mapping epigenetic modifications by sequencing technologies.
Journal article
Chen X. et al, (2023), Cell death and differentiation
Tumor monocyte content predicts immunochemotherapy outcomes in esophageal adenocarcinoma.
Journal article
Carroll TM. et al, (2023), Cancer cell, 41, 1222 - 1241.e7
Modular Oxidation of Cytosine Modifications and Their Application in Direct and Quantitative Sequencing of 5-Hydroxymethylcytosine.
Journal article
Xu H. et al, (2023), Journal of the American Chemical Society, 145, 7095 - 7100
TAPS: The Development of a Direct and Base-Resolution Sequencing Method for DNA Methylation
Journal article
Liu Y. and Song C-X., (2022), ACS Chemical Biology
Subtraction-free and bisulfite-free specific sequencing of 5-methylcytosine and its oxidized derivatives at base resolution
Journal article
Liu Y. et al, (2021), Nature Communications, 12
Cell-free DNA TAPS provides multimodal information for early cancer detection.
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Siejka-Zielińska P. et al, (2021), Science advances, 7
Endonuclease enrichment TAPS for cost-effective genome-wide base-resolution DNA methylation detection.
Journal article
Cheng J. et al, (2021), Nucleic acids research, 49
Accurate targeted long-read DNA methylation and hydroxymethylation sequencing with TAPS
Journal article
Liu Y. et al, (2020), Genome Biology, 21
Mapping the epigenetic modifications of DNA and RNA.
Journal article
Zhao L-Y. et al, (2020), Protein & cell, 11, 792 - 808
Homoharringtonine exhibits potent anti-tumor effect and modulates DNA epigenome in acute myeloid leukemia by targeting SP1/TET1/5hmC.
Journal article
Li C. et al, (2020), Haematologica, 105, 148 - 160
Systematic allelic analysis defines the interplay of key pathways in X chromosome inactivation
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Nesterova TB. et al, (2019), Nature Communications, 10
5-Carboxylcytosine is resistant towards phosphodiesterase I digestion: implications for epigenetic modification quantification by mass spectrometry
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Yuan F. et al, (2019), RSC ADVANCES, 9, 29010 - 29014
Bisulfite-free direct detection of 5-methylcytosine and 5-hydroxymethylcytosine at base resolution.
Journal article
Liu Y. et al, (2019), Nature biotechnology, 37, 424 - 429
Bisulfite-free and base-resolution analysis of 5-methylcytidine and 5-hydroxymethylcytidine in RNA with peroxotungstate
Journal article
Yuan F. et al, (2019), Chemical Communications, 55, 2328 - 2331
Glucose and glutamine availability regulate HepG2 transcriptional responses to low oxygen
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Lai AG. et al, (2018), Wellcome Open Research, 3, 126 - 126
Simultaneously Monitoring Immune Response and Microbial Infections during Pregnancy through Plasma cfRNA Sequencing
Journal article
Pan W. et al, (2017), Clinical Chemistry, 63, 1695 - 1704
5-Hydroxymethylcytosine signatures in cell-free DNA provide information about tumor types and stages
Journal article
Song C-X. et al, (2017), Cell Research, 27, 1231 - 1242