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GenomegaMap: Within-Species Genome-Wide dN/dS Estimation from over 10,000 Genomes

Journal article

Wilson DJ. et al, (2020), Molecular Biology and Evolution

Reply to Goeman et al.: Trade-offs in model averaging using multilevel tests

Journal article

Wilson DJ., (2019), Proceedings of the National Academy of Sciences, 201910684 - 201910684

DeepAMR for predicting co-occurrent resistance of Mycobacterium tuberculosis

Journal article

Yang Y. et al, (2019), Bioinformatics, 35, 3240 - 3249

Application of machine learning techniques to tuberculosis drug resistance analysis

Journal article

Kouchaki S. et al, (2019), Bioinformatics, 35, 2276 - 2282

Reply to Held: When is a harmonic mean p-value a Bayes factor?

Journal article

Wilson DJ., (2019), Proceedings of the National Academy of Sciences, 116, 5857 - 5858

The harmonic mean p-value for combining dependent tests

Journal article

Wilson DJ., (2019), Proceedings of the National Academy of Sciences, 116, 1195 - 1200

Bayesian inference of ancestral dates on bacterial phylogenetic trees.

Journal article

Didelot X. et al, (2018), Nucleic Acids Res, 46

Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing

Journal article

(2018), New England Journal of Medicine, 379, 1403 - 1415

The distribution of bacterial doubling times in the wild.

Journal article

Gibson B. et al, (2018), Proc Biol Sci, 285

Machine learning for classifying tuberculosis drug-resistance from DNA sequencing data

Journal article

Yang Y. et al, (2018), Bioinformatics, 34, 1666 - 1671

Bayesian reconstruction of transmission within outbreaks using genomic variants.

Journal article

De Maio N. et al, (2018), PLoS Comput Biol, 14

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