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Publications

Predicting individual patient and hospital-level discharge using machine learning

Wei J. et al, (2024), Communications Medicine, 4

Corrigendum to "No evidence of difference in mortality with amoxicillin versus co-amoxiclav for hospital treatment of community-acquired pneumonia" [J Infect 88 (2024) 106161].

Wei J. et al, (2024), The Journal of infection, 89

Predicting future hospital antimicrobial resistance prevalence using machine learning

Vihta K-D. et al, (2024), Communications Medicine, 4

Comparison of direct cDNA and PCR-cDNA Nanopore sequencing of RNA from <i>Escherichia coli</i> isolates.

Rodger G. et al, (2024), Microbial genomics, 10

Genomic epidemiology and longitudinal sampling of ward wastewater environments and patients reveals complexity of the transmission dynamics of blaKPC-carbapenemase-producing Enterobacterales in a hospital setting

Stoesser N. et al, (2024), JAC-Antimicrobial Resistance, 6

Expanding the use of mathematical modeling in healthcare epidemiology and infection prevention and control.

Grant R. et al, (2024), Infection control and hospital epidemiology, 1 - 6

'Bloodstream infection': A valuable concept we should keep in our toolbox.

Danielsen AS. et al, (2024), The Journal of infection, 89

Immunogenicity of COVID-19 vaccines in patients with follicular lymphoma receiving frontline chemoimmunotherapy.

Lim YJ. et al, (2024), British journal of haematology, 205, 440 - 451

The novel 2024 WHO Neisseria gonorrhoeae reference strains for global quality assurance of laboratory investigations and superseded WHO N. gonorrhoeae reference strains-phenotypic, genetic and reference genome characterization.

Unemo M. et al, (2024), The Journal of antimicrobial chemotherapy, 79, 1885 - 1899

Retrospective analysis of hospital electronic health records reveals unseen cases of acute hepatitis with unknown aetiology in adults in Oxfordshire

Tan CCS. et al, (2024), BMC Public Health, 24

Improving the representativeness of UK’s national COVID-19 Infection Survey through spatio-temporal regression and post-stratification

Pouwels KB. et al, (2024), Nature Communications, 15

Nanopore sequencing of influenza A and B in Oxfordshire and the United Kingdom, 2022–23

Cane J. et al, (2024), Journal of Infection, 88, 106164 - 106164

No evidence of difference in mortality with amoxicillin versus co-amoxiclav for hospital treatment of community-acquired pneumonia

Wei J. et al, (2024), Journal of Infection, 88, 106161 - 106161

Detecting changes in population trends in infection surveillance using community SARS-CoV-2 prevalence as an exemplar

Pritchard E. et al, (2024), American Journal of Epidemiology

Deep reinforcement learning for multi-class imbalanced training: applications in healthcare

Yang J. et al, (2024), Machine Learning, 113, 2655 - 2674

Distinct patterns of vital sign and inflammatory marker responses in adults with suspected bloodstream infection

Gu Q. et al, (2024), Journal of Infection, 88, 106156 - 106156

System-wide approaches to antimicrobial therapy and antimicrobial resistance in the UK: the AMR-X framework

Abel K. et al, (2024), The Lancet Microbe, 5, e500 - e507

SARS-CoV-2, influenza A/B and respiratory syncytial virus positivity and association with influenza-like illness and self-reported symptoms, over the 2022/23 winter season in the UK: a longitudinal surveillance cohort

Dietz E. et al, (2024), BMC Medicine, 22

Target enrichment improves culture-independent detection of Neisseria gonorrhoeae and antimicrobial resistance determinants direct from clinical samples with Nanopore sequencing

Street TL. et al, (2024), Microbial Genomics, 10

Risk of SARS-CoV-2 reinfection during multiple Omicron variant waves in the UK general population

Wei J. et al, (2024), Nature Communications, 15

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