High-resolution characterization of short-term temporal variability in the taxonomic and resistome composition of wastewater influent.
Journal article
Chau KK. et al, (2023), Microbial genomics, 9
Protection against SARS-CoV-2 Omicron BA.4/5 variant following booster vaccination or breakthrough infection in the UK.
Journal article
Wei J. et al, (2023), Nature communications, 14
Penicillin Binding Protein Substitutions Cooccur with Fluoroquinolone Resistance in Epidemic Lineages of Multidrug-Resistant Clostridioides difficile
Journal article
Dingle KE. et al, (2023), mBio
Enterobacterales plasmid sharing amongst human bloodstream infections, livestock, wastewater, and waterway niches in Oxfordshire, UK.
Journal article
Matlock W. et al, (2023), Elife, 12
Antibiotic review kit for hospitals (ARK-Hospital): a stepped-wedge cluster-randomised controlled trial
Journal article
Llewelyn MJ. et al, (2023), The Lancet Infectious Diseases, 23, 207 - 221
Genomic Sequencing from Sputum for Tuberculosis Disease Diagnosis, Lineage Determination, and Drug Susceptibility Prediction.
Journal article
Nilgiriwala K. et al, (2023), Journal of clinical microbiology
A longitudinal study reveals persistence of antimicrobial resistance on livestock farms is not due to antimicrobial usage alone.
Journal article
Smith RP. et al, (2023), Front Microbiol, 14
Bedaquiline and clofazimine resistance in Mycobacterium tuberculosis: an in-vitro and in-silico data analysis
Journal article
Sonnenkalb L. et al, (2023), The Lancet Microbe
Comparison of R9.4.1/Kit10 and R10/Kit12 Oxford Nanopore flowcells and chemistries in bacterial genome reconstruction
Journal article
Sanderson ND. et al, (2023), Microbial Genomics, 9
Evaluation of Nanopore sequencing for Mycobacterium tuberculosis drug susceptibility testing and outbreak investigation: a genomic analysis.
Journal article
Hall MB. et al, (2022), The Lancet. Microbe
Virus Detection and Identification in Minutes Using Single-Particle Imaging and Deep Learning.
Journal article
Shiaelis N. et al, (2022), ACS nano
Epidemiological cut-off values for a 96-well broth microdilution plate for high-throughput research antibiotic susceptibility testing ofM. tuberculosis
Journal article
(2022), European Respiratory Journal, 60, 2200239 - 2200239
Modern Solutions for Ancient Pathogens: Direct Pathogen Sequencing for Diagnosis of Lepromatous Leprosy and Cerebral Coenurosis.
Journal article
Young BC. et al, (2022), Open forum infectious diseases, 9
Mortality risks associated with empirical antibiotic activity in Escherichia coli bacteraemia: an analysis of electronic health records
Journal article
Yoon CH. et al, (2022), Journal of Antimicrobial Chemotherapy, 77, 2536 - 2545
Symptoms and Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Positivity in the General Population in the United Kingdom
Journal article
Vihta KD. et al, (2022), Clinical Infectious Diseases, 75, e329 - e337
High fluoroquinolone resistance proportions among multidrug-resistant tuberculosis driven by dominant L2 Mycobacterium tuberculosis clones in the Mumbai Metropolitan Region.
Journal article
Dreyer V. et al, (2022), Genome medicine, 14
A data compendium associating the genomes of 12,289 Mycobacterium tuberculosis isolates with quantitative resistance phenotypes to 13 antibiotics
Journal article
(2022), PLOS Biology, 20, e3001721 - e3001721
Genome-wide association studies of global Mycobacterium tuberculosis resistance to 13 antimicrobials in 10,228 genomes identify new resistance mechanisms
Journal article
(2022), PLOS Biology, 20, e3001755 - e3001755
Omicron-associated changes in SARS-CoV-2 symptoms in the United Kingdom
Journal article
Vihta1 KD. et al, (2022), Clinical Infectious Diseases
Antibody escape of SARS-CoV-2 Omicron BA.4 and BA.5 from vaccine and BA.1 serum.
Journal article
Tuekprakhon A. et al, (2022), Cell, 185, 2422 - 2433.e13