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Publications

DNA Thermo-Protection Facilitates Whole-Genome Sequencing of Mycobacteria Direct from Clinical Samples

George S. et al, (2020), Journal of Clinical Microbiology, 58

Clostridium difficile trehalose metabolism variants are common and not associated with adverse patient outcomes when variably present in the same lineage

Eyre DW. et al, (2019), EBioMedicine, 43, 347 - 355

A Role for Tetracycline Selection in Recent Evolution of Agriculture-Associated Clostridium difficile PCR Ribotype 078

Dingle KE. et al, (2019), mBio, 10

Two Distinct Patterns of Clostridium difficile Diversity Across Europe Indicating Contrasting Routes of Spread

Eyre DW. et al, (2018), Clinical Infectious Diseases, 67, 1035 - 1044

A role for tetracycline selection in the evolution of Clostridium difficile PCR-ribotype 078

Dingle KE. et al, (2018)

Epidemiology of Clostridium difficile in infants in Oxfordshire, UK: Risk factors for colonization and carriage, and genetic overlap with regional C. difficile infection strains

Stoesser N. et al, (2017), PLOS ONE, 12, e0182307 - e0182307

Clostridium difficile in England: can we stop washing our hands? – Authors' reply

Eyre DW. et al, (2017), The Lancet Infectious Diseases, 17, 478 - 479

Effects of control interventions on Clostridium difficile infection in England: an observational study

Dingle KE. et al, (2017), The Lancet Infectious Diseases, 17, 411 - 421

Detection of a cfr(B) Variant in German Enterococcus faecium Clinical Isolates and the Impact on Linezolid Resistance in Enterococcus spp.

Bender JK. et al, (2016), PLOS ONE, 11, e0167042 - e0167042

Wild bird-associatedCampylobacter jejuniisolates are a consistent source of human disease, in Oxfordshire, United Kingdom

Cody AJ. et al, (2015), Environmental Microbiology Reports, 7, 782 - 788

Emergence and spread of predominantly community-onset Clostridium difficile PCR ribotype 244 infection in Australia, 2010 to 2012.

Eyre DW. et al, (2015), Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin, 20

Emergence and spread of predominantly community-onset Clostridium difficile PCR ribotype 244 infection in Australia, 2010 to 2012

Eyre DW. et al, (2015), Eurosurveillance, 20

The Complexity and Diversity of the Pathogenicity Locus in Clostridium difficile Clade 5

Elliott B. et al, (2014), Genome Biology and Evolution, 6, 3159 - 3170

Can rapid integrated polymerase chain reaction-based diagnostics for gastrointestinal pathogens improve routine hospital infection control practice? A diagnostic study

Pankhurst L. et al, (2014), Health Technology Assessment, 18, 1 - 167

Evolutionary History of the Clostridium difficile Pathogenicity Locus

Dingle KE. et al, (2014), Genome Biology and Evolution, 6, 36 - 52

Whole genome sequencing and de novo assembly identifies Sydney-like variant noroviruses and recombinants during the winter 2012/2013 outbreak in England

Wong THN. et al, (2013), Virology Journal, 10

Diverse Sources of C. difficile Infection Identified on Whole-Genome Sequencing

Eyre DW. et al, (2013), New England Journal of Medicine, 369, 1195 - 1205

Real-Time Genomic Epidemiological Evaluation of Human Campylobacter Isolates by Use of Whole-Genome Multilocus Sequence Typing

Cody AJ. et al, (2013), Journal of Clinical Microbiology, 51, 2526 - 2534

A Modified RNA-Seq Approach for Whole Genome Sequencing of RNA Viruses from Faecal and Blood Samples

Batty EM. et al, (2013), PLoS ONE, 8, e66129 - e66129

Relationship Between Bacterial Strain Type, Host Biomarkers, and Mortality in Clostridium difficile Infection

Walker AS. et al, (2013), Clinical Infectious Diseases, 56, 1589 - 1600

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