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Antibody Status and Incidence of SARS-CoV-2 Infection in Health Care Workers

Journal article

Lumley SF. et al, (2021), New England Journal of Medicine, 384, 533 - 540

The duration, dynamics and determinants of SARS-CoV-2 antibody responses in individual healthcare workers

Journal article

Lumley SF. et al, (2021), Clinical Infectious Diseases

Case Report: Disseminated, rifampicin resistant Mycobacterium bovis (BCG) infection in an immunocompromised child

Journal article

Drysdale SB. et al, (2020), Wellcome Open Research, 5, 242 - 242

GenomegaMap: Within-Species Genome-Wide dN/dS Estimation from over 10,000 Genomes

Journal article

Wilson DJ. et al, (2020), Molecular Biology and Evolution, 37, 2450 - 2460

Multi-Label Random Forest Model for Tuberculosis Drug Resistance Classification and Mutation Ranking

Journal article

Kouchaki S. et al, (2020), Frontiers in Microbiology, 11

Elucidation of drug resistance mutations in Mycobacterium tuberculosis isolates from North India by whole-genome sequencing.

Journal article

Sethi S. et al, (2020), Journal of global antimicrobial resistance, 20, 11 - 15

Antibiotic resistance prediction for Mycobacterium tuberculosis from genome sequence data with Mykrobe

Journal article

Hunt M. et al, (2019), Wellcome Open Research, 4, 191 - 191

Towards standardisation: comparison of five whole genome sequencing (WGS) analysis pipelines for detection of epidemiologically linked tuberculosis cases.

Journal article

Jajou R. et al, (2019), Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin, 24

Building the Framework for Standardized Clinical Laboratory Reporting of Next-generation Sequencing Data for Resistance-associated Mutations in Mycobacterium tuberculosis Complex.

Journal article

Tornheim JA. et al, (2019), Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 69, 1631 - 1633

Cross-sectional study of the prevalence, causes and management of hospital-onset diarrhoea

Journal article

Mawer D. et al, (2019), Journal of Hospital Infection, 103, 200 - 209

Individualising therapy for drug-sensitive tuberculosis.

Journal article

Esmail H. et al, (2019), The Lancet. Respiratory medicine, 7, 834 - 835

DeepAMR for predicting co-occurrent resistance of Mycobacterium tuberculosis

Journal article

Yang Y. et al, (2019), Bioinformatics, 35, 3240 - 3249

Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues.

Journal article

Meehan CJ. et al, (2019), Nature reviews. Microbiology, 17, 533 - 545

Application of machine learning techniques to tuberculosis drug resistance analysis

Journal article

Kouchaki S. et al, (2019), Bioinformatics, 35, 2276 - 2282

Improved Performance Predicting Clarithromycin Resistance in Mycobacterium abscessus on an Independent Data Set

Journal article

Lipworth S. et al, (2019), Antimicrobial Agents and Chemotherapy, 63

SNP-IT Tool for Identifying Subspecies and Associated Lineages of Mycobacterium tuberculosis Complex.

Journal article

Lipworth S. et al, (2019), Emerging infectious diseases, 25, 482 - 488

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