Antibody Status and Incidence of SARS-CoV-2 Infection in Health Care Workers
Journal article
Lumley SF. et al, (2021), New England Journal of Medicine, 384, 533 - 540
The duration, dynamics and determinants of SARS-CoV-2 antibody responses in individual healthcare workers
Journal article
Lumley SF. et al, (2021), Clinical Infectious Diseases
Phylogenetically informative mutations in genes implicated in antibiotic resistance in Mycobacterium tuberculosis complex
Journal article
Merker M. et al, (2020), Genome Medicine, 12
Case Report: Disseminated, rifampicin resistant Mycobacterium bovis (BCG) infection in an immunocompromised child
Journal article
Drysdale SB. et al, (2020), Wellcome Open Research, 5, 242 - 242
Differential occupational risks to healthcare workers from SARS-CoV-2 observed during a prospective observational study
Journal article
Eyre DW. et al, (2020), eLife, 9
GenomegaMap: Within-Species Genome-Wide dN/dS Estimation from over 10,000 Genomes
Journal article
Wilson DJ. et al, (2020), Molecular Biology and Evolution, 37, 2450 - 2460
Multi-Label Random Forest Model for Tuberculosis Drug Resistance Classification and Mutation Ranking
Journal article
Kouchaki S. et al, (2020), Frontiers in Microbiology, 11
Sources of Multidrug Resistance in Patients With Previous Isoniazid-Resistant Tuberculosis Identified Using Whole Genome Sequencing: A Longitudinal Cohort Study
Journal article
Vijay S. et al, (2020), Clinical Infectious Diseases
Elucidation of drug resistance mutations in Mycobacterium tuberculosis isolates from North India by whole-genome sequencing.
Journal article
Sethi S. et al, (2020), Journal of global antimicrobial resistance, 20, 11 - 15
Antibiotic resistance prediction for Mycobacterium tuberculosis from genome sequence data with Mykrobe
Journal article
Hunt M. et al, (2019), Wellcome Open Research, 4, 191 - 191
Towards standardisation: comparison of five whole genome sequencing (WGS) analysis pipelines for detection of epidemiologically linked tuberculosis cases.
Journal article
Jajou R. et al, (2019), Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin, 24
Building the Framework for Standardized Clinical Laboratory Reporting of Next-generation Sequencing Data for Resistance-associated Mutations in Mycobacterium tuberculosis Complex.
Journal article
Tornheim JA. et al, (2019), Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 69, 1631 - 1633
Cross-sectional study of the prevalence, causes and management of hospital-onset diarrhoea
Journal article
Mawer D. et al, (2019), Journal of Hospital Infection, 103, 200 - 209
Individualising therapy for drug-sensitive tuberculosis.
Journal article
Esmail H. et al, (2019), The Lancet. Respiratory medicine, 7, 834 - 835
DeepAMR for predicting co-occurrent resistance of Mycobacterium tuberculosis
Journal article
Yang Y. et al, (2019), Bioinformatics, 35, 3240 - 3249
Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues.
Journal article
Meehan CJ. et al, (2019), Nature reviews. Microbiology, 17, 533 - 545
Application of machine learning techniques to tuberculosis drug resistance analysis
Journal article
Kouchaki S. et al, (2019), Bioinformatics, 35, 2276 - 2282
Improved Performance Predicting Clarithromycin Resistance in Mycobacterium abscessus on an Independent Data Set
Journal article
Lipworth S. et al, (2019), Antimicrobial Agents and Chemotherapy, 63
Corrigendum: Automated detection of bacterial growth on 96-well plates for high-throughput drug susceptibility testing of Mycobacterium tuberculosis.
Journal article
Fowler PW. et al, (2019), Microbiology (Reading, England), 165
SNP-IT Tool for Identifying Subspecies and Associated Lineages of Mycobacterium tuberculosis Complex.
Journal article
Lipworth S. et al, (2019), Emerging infectious diseases, 25, 482 - 488